BBMRI.de/GBA Implementation Guide - Local Development build (v1.2.0). See the Directory of published versions
{
"resourceType" : "Bundle",
"id" : "53ef12a3-1e31-4fc1-adf6-9d30dc6c4784",
"type" : "transaction",
"entry" : [
{
"fullUrl" : "http://example.com/Patient/0",
"resource" : {
"resourceType" : "Patient",
"id" : "0",
"meta" : {
"profile" : [
"https://fhir.bbmri.de/StructureDefinition/Patient"
]
},
"text" : {
"status" : "generated",
"div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: Patient</b><a name=\"0\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource Patient "0" </p><p style=\"margin-bottom: 0px\">Profile: <a href=\"StructureDefinition-Patient.html\">Patient</a></p></div><p><b>gender</b>: male</p><p><b>birthDate</b>: 1989-11-18</p></div>"
},
"gender" : "male",
"birthDate" : "1989-11-18"
},
"request" : {
"method" : "PUT",
"url" : "Patient/0"
}
},
{
"fullUrl" : "http://example.com/Observation/0-bmi",
"resource" : {
"resourceType" : "Observation",
"id" : "0-bmi",
"meta" : {
"profile" : [
"https://fhir.bbmri.de/StructureDefinition/Bmi"
]
},
"text" : {
"status" : "generated",
"div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: Observation</b><a name=\"0-bmi\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource Observation "0-bmi" </p><p style=\"margin-bottom: 0px\">Profile: <a href=\"StructureDefinition-Bmi.html\">BMI</a></p></div><p><b>status</b>: final</p><p><b>category</b>: Vital Signs <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"http://terminology.hl7.org/5.0.0/CodeSystem-observation-category.html\">Observation Category Codes</a>#vital-signs)</span></p><p><b>code</b>: 39156-5 <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"https://loinc.org/\">LOINC</a>#39156-5)</span></p><p><b>subject</b>: <a href=\"#Patient_0\">See above (Patient/0)</a></p><p><b>effective</b>: 2005-06-17</p><p><b>value</b>: 36.68645245341373 kg/m2<span style=\"background: LightGoldenRodYellow\"> (Details: UCUM code kg/m2 = 'kg/m2')</span></p></div>"
},
"status" : "final",
"category" : [
{
"coding" : [
{
"system" : "http://terminology.hl7.org/CodeSystem/observation-category",
"code" : "vital-signs"
}
]
}
],
"code" : {
"coding" : [
{
"system" : "http://loinc.org",
"code" : "39156-5"
}
]
},
"subject" : {
"reference" : "Patient/0"
},
"effectiveDateTime" : "2005-06-17",
"valueQuantity" : {
"value" : 36.68645245341373,
"unit" : "kg/m2",
"system" : "http://unitsofmeasure.org",
"code" : "kg/m2"
}
},
"request" : {
"method" : "PUT",
"url" : "Observation/0-bmi"
}
},
{
"fullUrl" : "http://example.com/Observation/0-body-height",
"resource" : {
"resourceType" : "Observation",
"id" : "0-body-height",
"meta" : {
"profile" : [
"https://fhir.bbmri.de/StructureDefinition/BodyHeight"
]
},
"text" : {
"status" : "generated",
"div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: Observation</b><a name=\"0-body-height\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource Observation "0-body-height" </p><p style=\"margin-bottom: 0px\">Profile: <a href=\"StructureDefinition-BodyHeight.html\">Body Height</a></p></div><p><b>status</b>: final</p><p><b>category</b>: Vital Signs <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"http://terminology.hl7.org/5.0.0/CodeSystem-observation-category.html\">Observation Category Codes</a>#vital-signs)</span></p><p><b>code</b>: 8302-2 <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"https://loinc.org/\">LOINC</a>#8302-2)</span></p><p><b>subject</b>: <a href=\"#Patient_0\">See above (Patient/0)</a></p><p><b>effective</b>: 2005-06-17</p><p><b>value</b>: 198.58090348834853 cm<span style=\"background: LightGoldenRodYellow\"> (Details: UCUM code cm = 'cm')</span></p></div>"
},
"status" : "final",
"category" : [
{
"coding" : [
{
"system" : "http://terminology.hl7.org/CodeSystem/observation-category",
"code" : "vital-signs"
}
]
}
],
"code" : {
"coding" : [
{
"system" : "http://loinc.org",
"code" : "8302-2"
}
]
},
"subject" : {
"reference" : "Patient/0"
},
"effectiveDateTime" : "2005-06-17",
"valueQuantity" : {
"value" : 198.58090348834853,
"unit" : "cm",
"system" : "http://unitsofmeasure.org",
"code" : "cm"
}
},
"request" : {
"method" : "PUT",
"url" : "Observation/0-body-height"
}
},
{
"fullUrl" : "http://example.com/Observation/0-body-weight",
"resource" : {
"resourceType" : "Observation",
"id" : "0-body-weight",
"meta" : {
"profile" : [
"https://fhir.bbmri.de/StructureDefinition/BodyWeight"
]
},
"text" : {
"status" : "generated",
"div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: Observation</b><a name=\"0-body-weight\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource Observation "0-body-weight" </p><p style=\"margin-bottom: 0px\">Profile: <a href=\"StructureDefinition-BodyWeight.html\">Body Weight</a></p></div><p><b>status</b>: final</p><p><b>category</b>: Vital Signs <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"http://terminology.hl7.org/5.0.0/CodeSystem-observation-category.html\">Observation Category Codes</a>#vital-signs)</span></p><p><b>code</b>: 29463-7 <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"https://loinc.org/\">LOINC</a>#29463-7)</span></p><p><b>subject</b>: <a href=\"#Patient_0\">See above (Patient/0)</a></p><p><b>effective</b>: 2005-06-17</p><p><b>value</b>: 144.67073319145982 kg<span style=\"background: LightGoldenRodYellow\"> (Details: UCUM code kg = 'kg')</span></p></div>"
},
"status" : "final",
"category" : [
{
"coding" : [
{
"system" : "http://terminology.hl7.org/CodeSystem/observation-category",
"code" : "vital-signs"
}
]
}
],
"code" : {
"coding" : [
{
"system" : "http://loinc.org",
"code" : "29463-7"
}
]
},
"subject" : {
"reference" : "Patient/0"
},
"effectiveDateTime" : "2005-06-17",
"valueQuantity" : {
"value" : 144.67073319145982,
"unit" : "kg",
"system" : "http://unitsofmeasure.org",
"code" : "kg"
}
},
"request" : {
"method" : "PUT",
"url" : "Observation/0-body-weight"
}
},
{
"fullUrl" : "http://example.com/Observation/0-tobacco-use",
"resource" : {
"resourceType" : "Observation",
"id" : "0-tobacco-use",
"meta" : {
"profile" : [
"https://fhir.bbmri.de/StructureDefinition/TobaccoUse"
]
},
"text" : {
"status" : "generated",
"div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: Observation</b><a name=\"0-tobacco-use\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource Observation "0-tobacco-use" </p><p style=\"margin-bottom: 0px\">Profile: <a href=\"StructureDefinition-TobaccoUse.html\">TobaccoUse</a></p></div><p><b>status</b>: final</p><p><b>code</b>: 72166-2 <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"https://loinc.org/\">LOINC</a>#72166-2)</span></p><p><b>subject</b>: <a href=\"#Patient_0\">See above (Patient/0)</a></p><p><b>effective</b>: 2005-06-17</p><p><b>value</b>: LA18977-1 <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"https://loinc.org/\">LOINC</a>#LA18977-1)</span></p></div>"
},
"status" : "final",
"code" : {
"coding" : [
{
"system" : "http://loinc.org",
"code" : "72166-2"
}
]
},
"subject" : {
"reference" : "Patient/0"
},
"effectiveDateTime" : "2005-06-17",
"valueCodeableConcept" : {
"coding" : [
{
"system" : "http://loinc.org",
"code" : "LA18977-1"
}
]
}
},
"request" : {
"method" : "PUT",
"url" : "Observation/0-tobacco-use"
}
},
{
"fullUrl" : "http://example.com/Specimen/0-specimen",
"resource" : {
"resourceType" : "Specimen",
"id" : "0-specimen",
"meta" : {
"profile" : [
"https://fhir.bbmri.de/StructureDefinition/Specimen"
]
},
"text" : {
"status" : "extensions",
"div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: Specimen</b><a name=\"0-specimen\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource Specimen "0-specimen" </p><p style=\"margin-bottom: 0px\">Profile: <a href=\"StructureDefinition-Specimen.html\">Specimen</a></p></div><p><b>Storage Temperature</b>: Degrees Celsius 2 to 10 <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"CodeSystem-StorageTemperature.html\">Storage Temperature</a>#temperature2to10)</span></p><p><b>Custodian</b>: <a href=\"https://simplifier.net/resolve?scope=de.basisprofil.r4@0.9.6&canonical=http://blaze.example.com/fhir/Organization/collection-2\">http://blaze.example.com/fhir/Organization/collection-2</a></p><p><b>Sample Diagnosis</b>: Unknown <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"CodeSystem-OtherSampleDiagnosis.html\">Other Sample Diagnosis</a>#unknown)</span></p><p><b>type</b>: Whole blood <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"CodeSystem-SampleMaterialType.html\">Sample Material Type</a>#whole-blood)</span></p><p><b>subject</b>: <a href=\"#Patient_0\">See above (Patient/0)</a></p><h3>Collections</h3><table class=\"grid\"><tr><td style=\"display: none\">-</td><td><b>Collected[x]</b></td><td><b>FastingStatus[x]</b></td></tr><tr><td style=\"display: none\">*</td><td>2005-06-17</td><td>The patient indicated they did not fast prior to the procedure. <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"http://terminology.hl7.org/5.0.0/CodeSystem-v2-0916.html\">relevantClincialInformation</a>#NF)</span></td></tr></table></div>"
},
"extension" : [
{
"url" : "https://fhir.bbmri.de/StructureDefinition/StorageTemperature",
"valueCodeableConcept" : {
"coding" : [
{
"system" : "https://fhir.bbmri.de/CodeSystem/StorageTemperature",
"code" : "temperature2to10"
}
]
}
},
{
"url" : "https://fhir.bbmri.de/StructureDefinition/Custodian",
"valueReference" : {
"reference" : "http://blaze.example.com/fhir/Organization/collection-2"
}
},
{
"url" : "https://fhir.bbmri.de/StructureDefinition/SampleDiagnosis",
"valueCodeableConcept" : {
"coding" : [
{
"system" : "https://fhir.bbmri.de/CodeSystem/OtherSampleDiagnosis",
"code" : "unknown"
}
]
}
}
],
"type" : {
"coding" : [
{
"system" : "https://fhir.bbmri.de/CodeSystem/SampleMaterialType",
"code" : "whole-blood"
}
]
},
"subject" : {
"reference" : "Patient/0"
},
"collection" : {
"collectedDateTime" : "2005-06-17",
"fastingStatusCodeableConcept" : {
"coding" : [
{
"system" : "http://terminology.hl7.org/CodeSystem/v2-0916",
"code" : "NF"
}
]
}
}
},
"request" : {
"method" : "PUT",
"url" : "Specimen/0-specimen"
}
}
]
}
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