BBMRI.de/GBA Implementation Guide
1.2.0 - CI Build

BBMRI.de/GBA Implementation Guide - Local Development build (v1.2.0). See the Directory of published versions

Artifacts Summary

Contents:

This page provides a list of the FHIR artifacts defined as part of this implementation guide.

Knowledge Artifacts: Measure

These define measures as part of content in this implementation guide.

Patient Quality Reports

This measure contains various patient related stratifiers to help to evaluate data quality.
Specimen Quality Reports

This measure contains various specimen related stratifiers to help to evaluate data quality.

Knowledge Artifacts: Libraries

These define logic, asset collections and other libraries as part of content in this implementation guide.

Patient Quality Reports

This library contains various expressions used in different patient related quality reports.
Specimen Quality Reports

This library contains various expressions used in different specimen related quality reports.

Structures: Resource Profiles

These define constraints on FHIR resources for systems conforming to this implementation guide.

BMI
Biobank
Body Height
Body Weight
Cause of Death
Collection
Condition
Network Membership

Resource representing the membership of a biobank in a biobank network
Patient

Resoure representing a sample donor
Specimen
TobaccoUse

Tobacco use

Structures: Extension Definitions

These define constraints on FHIR data types for systems conforming to this implementation guide.

Access Policy
Bioresource Reference
Capabilities
Collaboration
Collection Type

The type of sample collections governed by the Organization.
Contact Role
Custodian
Data Category

The categories of data that are available as part of the collection
ID Card
IT Support
Juridical Person

Name of the legal entity of the organization
Organization Description

Description of the organization in English
Parent Collection
Partner Charter Signed
Quality Standard

Organization quality assessment
Resource Management
Sample Diagnosis
Storage Temperature

Terminology: Value Sets

These define sets of codes used by systems conforming to this implementation guide.

Biobank Capabilities
Collection Type
Data Category
Quality Standard
Resource Type
Sample Material Type
Storage Temperature
other sample diagnosis

Terminology: Code Systems

These define new code systems used by systems conforming to this implementation guide.

Biobank Capabilities
Collection Type
Contact Type
Data Category
Other Sample Diagnosis

Contains the additional (not contained in ICD-10) codes needed for coding the MIABIS Sample Diagnosis plus a non-MIABIS code for indicating tumor material without a specific diagnosis.
Quality Standard
Resource Type

Types of resources that may be governed by a biobank or its collections
Sample Material Type

The type of material the sample consists of.
Storage Temperature

Example: Example Instances

These are example instances that show what data produced and consumed by systems conforming with this implementation guide might look like.

0
0-bmi
0-body-height
0-body-weight
0-specimen
0-tobacco-use
53ef12a3-1e31-4fc1-adf6-9d30dc6c4784
example
exampleBiobank
exampleCollection
exampleCollectionRD