BBMRI.de/GBA Implementation Guide
1.2.0 - CI Build

BBMRI.de/GBA Implementation Guide - Local Development build (v1.2.0). See the Directory of published versions

: Sample Material Type - JSON Representation

Active as of 2023-09-01

Raw json | Download


{
  "resourceType" : "CodeSystem",
  "id" : "SampleMaterialType",
  "text" : {
    "status" : "generated",
    "div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\">Placeholder</div>"
  },
  "url" : "https://fhir.bbmri.de/CodeSystem/SampleMaterialType",
  "version" : "1.2.0",
  "name" : "SampleMaterialType",
  "title" : "Sample Material Type",
  "status" : "active",
  "date" : "2023-09-01T11:58:43+00:00",
  "publisher" : "bbmri.de",
  "contact" : [
    {
      "name" : "bbmri.de",
      "telecom" : [
        {
          "system" : "url",
          "value" : "bbmri.de"
        },
        {
          "system" : "email",
          "value" : "feedback@germanbiobanknode.de"
        }
      ]
    }
  ],
  "description" : "The type of material the sample consists of.",
  "hierarchyMeaning" : "is-a",
  "compositional" : false,
  "content" : "complete",
  "concept" : [
    {
      "code" : "whole-blood",
      "display" : "Whole blood"
    },
    {
      "code" : "bone-marrow",
      "display" : "Bone marrow"
    },
    {
      "code" : "buffy-coat",
      "display" : "Buffy-Coat"
    },
    {
      "code" : "dried-whole-blood",
      "display" : "Dried whole blood"
    },
    {
      "code" : "peripheral-blood-cells-vital",
      "display" : "Peripheral blood mononuclear cells (PBMCs, viable)"
    },
    {
      "code" : "blood-plasma",
      "display" : "Plasma",
      "concept" : [
        {
          "code" : "plasma-edta",
          "display" : "Plasma, EDTA"
        },
        {
          "code" : "plasma-citrat",
          "display" : "Plasma, Citrat"
        },
        {
          "code" : "plasma-heparin",
          "display" : "Plasma, Heparin"
        },
        {
          "code" : "plasma-cell-free",
          "display" : "Plasma, cell free"
        },
        {
          "code" : "plasma-other",
          "display" : "Plasma, other"
        }
      ]
    },
    {
      "code" : "blood-serum",
      "display" : "Serum"
    },
    {
      "code" : "ascites",
      "display" : "Ascites"
    },
    {
      "code" : "csf-liquor",
      "display" : "CSF/Liquor"
    },
    {
      "code" : "saliva",
      "display" : "Saliva"
    },
    {
      "code" : "stool-faeces",
      "display" : "Stool/Faeces"
    },
    {
      "code" : "urine",
      "display" : "Urine"
    },
    {
      "code" : "swab",
      "display" : "Swab"
    },
    {
      "code" : "liquid-other",
      "display" : "Other liquid biosample/storage"
    },
    {
      "code" : "tissue-ffpe",
      "display" : "Tissue FFPE",
      "concept" : [
        {
          "code" : "tumor-tissue-ffpe",
          "display" : "Tumor tissue (FFPE)"
        },
        {
          "code" : "normal-tissue-ffpe",
          "display" : "Normal tissue (FFPE)"
        },
        {
          "code" : "other-tissue-ffpe",
          "display" : "Other tissue (FFPE)"
        }
      ]
    },
    {
      "code" : "tissue-frozen",
      "display" : "Tissue frozen",
      "concept" : [
        {
          "code" : "tumor-tissue-frozen",
          "display" : "Tumor tissue (frozen)"
        },
        {
          "code" : "normal-tissue-frozen",
          "display" : "Normal tissue (frozen)"
        },
        {
          "code" : "other-tissue-frozen",
          "display" : "Other tissue (frozen)"
        }
      ]
    },
    {
      "code" : "tissue-other",
      "display" : "Other tissue storage"
    },
    {
      "code" : "dna",
      "display" : "DNA",
      "concept" : [
        {
          "code" : "cf-dna",
          "display" : "cfDNA"
        },
        {
          "code" : "g-dna",
          "display" : "gDNA"
        }
      ]
    },
    {
      "code" : "rna",
      "display" : "RNA"
    },
    {
      "code" : "derivative-other",
      "display" : "Other derivative"
    }
  ]
}