BBMRI.de/GBA Implementation Guide
1.2.0 - CI Build

BBMRI.de/GBA Implementation Guide - Local Development build (v1.2.0). See the Directory of published versions

: Sample Material Type - TTL Representation

Active as of 2023-09-01

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@prefix fhir: <http://hl7.org/fhir/> .
@prefix owl: <http://www.w3.org/2002/07/owl#> .
@prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> .
@prefix xsd: <http://www.w3.org/2001/XMLSchema#> .

# - resource -------------------------------------------------------------------

 a fhir:CodeSystem ;
  fhir:nodeRole fhir:treeRoot ;
  fhir:id [ fhir:v "SampleMaterialType"] ; # 
  fhir:text [
fhir:status [ fhir:v "generated" ] ;
fhir:div "<div xmlns=\"http://www.w3.org/1999/xhtml\">Placeholder</div>"
  ] ; # 
  fhir:url [ fhir:v "https://fhir.bbmri.de/CodeSystem/SampleMaterialType"^^xsd:anyURI] ; # 
  fhir:version [ fhir:v "1.2.0"] ; # 
  fhir:name [ fhir:v "SampleMaterialType"] ; # 
  fhir:title [ fhir:v "Sample Material Type"] ; # 
  fhir:status [ fhir:v "active"] ; # 
  fhir:date [ fhir:v "2023-09-01T11:58:43+00:00"^^xsd:dateTime] ; # 
  fhir:publisher [ fhir:v "bbmri.de"] ; # 
  fhir:contact ( [
fhir:name [ fhir:v "bbmri.de" ] ;
    ( fhir:telecom [
fhir:system [ fhir:v "url" ] ;
fhir:value [ fhir:v "bbmri.de" ]     ] [
fhir:system [ fhir:v "email" ] ;
fhir:value [ fhir:v "feedback@germanbiobanknode.de" ]     ] )
  ] ) ; # 
  fhir:description [ fhir:v "The type of material the sample consists of."] ; # 
  fhir:hierarchyMeaning [ fhir:v "is-a"] ; # 
  fhir:compositional [ fhir:v "false"^^xsd:boolean] ; # 
  fhir:content [ fhir:v "complete"] ; # 
  fhir:concept ( [
fhir:code [ fhir:v "whole-blood" ] ;
fhir:display [ fhir:v "Whole blood" ]
  ] [
fhir:code [ fhir:v "bone-marrow" ] ;
fhir:display [ fhir:v "Bone marrow" ]
  ] [
fhir:code [ fhir:v "buffy-coat" ] ;
fhir:display [ fhir:v "Buffy-Coat" ]
  ] [
fhir:code [ fhir:v "dried-whole-blood" ] ;
fhir:display [ fhir:v "Dried whole blood" ]
  ] [
fhir:code [ fhir:v "peripheral-blood-cells-vital" ] ;
fhir:display [ fhir:v "Peripheral blood mononuclear cells (PBMCs, viable)" ]
  ] [
fhir:code [ fhir:v "blood-plasma" ] ;
fhir:display [ fhir:v "Plasma" ] ;
    ( fhir:concept [
fhir:code [ fhir:v "plasma-edta" ] ;
fhir:display [ fhir:v "Plasma, EDTA" ]     ] [
fhir:code [ fhir:v "plasma-citrat" ] ;
fhir:display [ fhir:v "Plasma, Citrat" ]     ] [
fhir:code [ fhir:v "plasma-heparin" ] ;
fhir:display [ fhir:v "Plasma, Heparin" ]     ] [
fhir:code [ fhir:v "plasma-cell-free" ] ;
fhir:display [ fhir:v "Plasma, cell free" ]     ] [
fhir:code [ fhir:v "plasma-other" ] ;
fhir:display [ fhir:v "Plasma, other" ]     ] )
  ] [
fhir:code [ fhir:v "blood-serum" ] ;
fhir:display [ fhir:v "Serum" ]
  ] [
fhir:code [ fhir:v "ascites" ] ;
fhir:display [ fhir:v "Ascites" ]
  ] [
fhir:code [ fhir:v "csf-liquor" ] ;
fhir:display [ fhir:v "CSF/Liquor" ]
  ] [
fhir:code [ fhir:v "saliva" ] ;
fhir:display [ fhir:v "Saliva" ]
  ] [
fhir:code [ fhir:v "stool-faeces" ] ;
fhir:display [ fhir:v "Stool/Faeces" ]
  ] [
fhir:code [ fhir:v "urine" ] ;
fhir:display [ fhir:v "Urine" ]
  ] [
fhir:code [ fhir:v "swab" ] ;
fhir:display [ fhir:v "Swab" ]
  ] [
fhir:code [ fhir:v "liquid-other" ] ;
fhir:display [ fhir:v "Other liquid biosample/storage" ]
  ] [
fhir:code [ fhir:v "tissue-ffpe" ] ;
fhir:display [ fhir:v "Tissue FFPE" ] ;
    ( fhir:concept [
fhir:code [ fhir:v "tumor-tissue-ffpe" ] ;
fhir:display [ fhir:v "Tumor tissue (FFPE)" ]     ] [
fhir:code [ fhir:v "normal-tissue-ffpe" ] ;
fhir:display [ fhir:v "Normal tissue (FFPE)" ]     ] [
fhir:code [ fhir:v "other-tissue-ffpe" ] ;
fhir:display [ fhir:v "Other tissue (FFPE)" ]     ] )
  ] [
fhir:code [ fhir:v "tissue-frozen" ] ;
fhir:display [ fhir:v "Tissue frozen" ] ;
    ( fhir:concept [
fhir:code [ fhir:v "tumor-tissue-frozen" ] ;
fhir:display [ fhir:v "Tumor tissue (frozen)" ]     ] [
fhir:code [ fhir:v "normal-tissue-frozen" ] ;
fhir:display [ fhir:v "Normal tissue (frozen)" ]     ] [
fhir:code [ fhir:v "other-tissue-frozen" ] ;
fhir:display [ fhir:v "Other tissue (frozen)" ]     ] )
  ] [
fhir:code [ fhir:v "tissue-other" ] ;
fhir:display [ fhir:v "Other tissue storage" ]
  ] [
fhir:code [ fhir:v "dna" ] ;
fhir:display [ fhir:v "DNA" ] ;
    ( fhir:concept [
fhir:code [ fhir:v "cf-dna" ] ;
fhir:display [ fhir:v "cfDNA" ]     ] [
fhir:code [ fhir:v "g-dna" ] ;
fhir:display [ fhir:v "gDNA" ]     ] )
  ] [
fhir:code [ fhir:v "rna" ] ;
fhir:display [ fhir:v "RNA" ]
  ] [
fhir:code [ fhir:v "derivative-other" ] ;
fhir:display [ fhir:v "Other derivative" ]
  ] ) . #