BBMRI.de/GBA Implementation Guide - Local Development build (v1.2.0). See the Directory of published versions

• Narrative Content
• XML
• JSON
• TTL

: Specimen Quality Reports - JSON Representation

Draft as of 2023-09-01

Raw json | Download

{
  "resourceType" : "Measure",
  "id" : "SpecimenQualityReports",
  "text" : {
    "status" : "generated",
    "div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: Measure</b><a name=\"SpecimenQualityReports\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource Measure &quot;SpecimenQualityReports&quot; </p></div><p><b>url</b>: <code>https://fhir.bbmri.de/Measure/SpecimenQualityReports</code></p><p><b>version</b>: 1.2.0</p><p><b>name</b>: SpecimenQualityReports</p><p><b>title</b>: Specimen Quality Reports</p><p><b>status</b>: draft</p><p><b>subject</b>: Specimen <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"http://hl7.org/fhir/R4/codesystem-resource-types.html\">ResourceType</a>#Specimen)</span></p><p><b>date</b>: 2023-09-01 11:58:43+0000</p><p><b>publisher</b>: bbmri.de</p><p><b>contact</b>: bbmri.de: <a href=\"bbmri.de\">bbmri.de</a>,<a href=\"mailto:feedback@germanbiobanknode.de\">feedback@germanbiobanknode.de</a></p><p><b>description</b>: This measure contains various specimen related stratifiers to help to evaluate data quality.</p><p><b>library</b>: <a href=\"Library-SpecimenQualityReports.html\">Specimen Quality Reports</a></p><p><b>scoring</b>: Cohort <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"http://terminology.hl7.org/5.0.0/CodeSystem-measure-scoring.html\">MeasureScoring</a>#cohort)</span></p><blockquote><p><b>group</b></p><blockquote><p><b>population</b></p><p><b>code</b>: Initial Population <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"http://terminology.hl7.org/5.0.0/CodeSystem-measure-population.html\">MeasurePopulationType</a>#initial-population)</span></p><h3>Criteria</h3><table class=\"grid\"><tr><td style=\"display: none\">-</td><td><b>Language</b></td><td><b>Expression</b></td></tr><tr><td style=\"display: none\">*</td><td>text/cql</td><td>InInitialPopulation</td></tr></table></blockquote><blockquote><p><b>stratifier</b></p><p><b>code</b>: FirstSampleMaterialType <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> ()</span></p><h3>Criteria</h3><table class=\"grid\"><tr><td style=\"display: none\">-</td><td><b>Language</b></td><td><b>Expression</b></td></tr><tr><td style=\"display: none\">*</td><td>text/cql</td><td>FirstSampleMaterialType</td></tr></table></blockquote><blockquote><p><b>stratifier</b></p><p><b>code</b>: NumberOfSampleMaterialTypes <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> ()</span></p><h3>Criteria</h3><table class=\"grid\"><tr><td style=\"display: none\">-</td><td><b>Language</b></td><td><b>Expression</b></td></tr><tr><td style=\"display: none\">*</td><td>text/cql</td><td>NumberOfSampleMaterialTypes</td></tr></table></blockquote><blockquote><p><b>stratifier</b></p><p><b>code</b>: CollectedYear <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> ()</span></p><h3>Criteria</h3><table class=\"grid\"><tr><td style=\"display: none\">-</td><td><b>Language</b></td><td><b>Expression</b></td></tr><tr><td style=\"display: none\">*</td><td>text/cql</td><td>CollectedYear</td></tr></table></blockquote><blockquote><p><b>stratifier</b></p><p><b>code</b>: CollectedMonth <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> ()</span></p><h3>Criteria</h3><table class=\"grid\"><tr><td style=\"display: none\">-</td><td><b>Language</b></td><td><b>Expression</b></td></tr><tr><td style=\"display: none\">*</td><td>text/cql</td><td>CollectedMonth</td></tr></table></blockquote><blockquote><p><b>stratifier</b></p><p><b>code</b>: CollectedDay <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> ()</span></p><h3>Criteria</h3><table class=\"grid\"><tr><td style=\"display: none\">-</td><td><b>Language</b></td><td><b>Expression</b></td></tr><tr><td style=\"display: none\">*</td><td>text/cql</td><td>CollectedDay</td></tr></table></blockquote><blockquote><p><b>stratifier</b></p><p><b>code</b>: CollectedHour <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> ()</span></p><h3>Criteria</h3><table class=\"grid\"><tr><td style=\"display: none\">-</td><td><b>Language</b></td><td><b>Expression</b></td></tr><tr><td style=\"display: none\">*</td><td>text/cql</td><td>CollectedHour</td></tr></table></blockquote><blockquote><p><b>stratifier</b></p><p><b>code</b>: StorageTemperatureCodes <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> ()</span></p><h3>Criteria</h3><table class=\"grid\"><tr><td style=\"display: none\">-</td><td><b>Language</b></td><td><b>Expression</b></td></tr><tr><td style=\"display: none\">*</td><td>text/cql</td><td>StorageTemperatureCodes</td></tr></table></blockquote><blockquote><p><b>stratifier</b></p><p><b>code</b>: NumberOfStorageTemperatureCodes <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> ()</span></p><h3>Criteria</h3><table class=\"grid\"><tr><td style=\"display: none\">-</td><td><b>Language</b></td><td><b>Expression</b></td></tr><tr><td style=\"display: none\">*</td><td>text/cql</td><td>NumberOfStorageTemperatureCodes</td></tr></table></blockquote><blockquote><p><b>stratifier</b></p><p><b>code</b>: SampleDiagnosisICD10Codes <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> ()</span></p><h3>Criteria</h3><table class=\"grid\"><tr><td style=\"display: none\">-</td><td><b>Language</b></td><td><b>Expression</b></td></tr><tr><td style=\"display: none\">*</td><td>text/cql</td><td>SampleDiagnosisICD10Codes</td></tr></table></blockquote><blockquote><p><b>stratifier</b></p><p><b>code</b>: NumberOfSampleDiagnosesICD10Codes <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> ()</span></p><h3>Criteria</h3><table class=\"grid\"><tr><td style=\"display: none\">-</td><td><b>Language</b></td><td><b>Expression</b></td></tr><tr><td style=\"display: none\">*</td><td>text/cql</td><td>NumberOfSampleDiagnosesICD10Codes</td></tr></table></blockquote><blockquote><p><b>stratifier</b></p><p><b>code</b>: SampleDiagnosisICD10GMCodes <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> ()</span></p><h3>Criteria</h3><table class=\"grid\"><tr><td style=\"display: none\">-</td><td><b>Language</b></td><td><b>Expression</b></td></tr><tr><td style=\"display: none\">*</td><td>text/cql</td><td>SampleDiagnosisICD10GMCodes</td></tr></table></blockquote><blockquote><p><b>stratifier</b></p><p><b>code</b>: NumberOfSampleDiagnosesICD10GMCodes <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> ()</span></p><h3>Criteria</h3><table class=\"grid\"><tr><td style=\"display: none\">-</td><td><b>Language</b></td><td><b>Expression</b></td></tr><tr><td style=\"display: none\">*</td><td>text/cql</td><td>NumberOfSampleDiagnosesICD10GMCodes</td></tr></table></blockquote><blockquote><p><b>stratifier</b></p><p><b>code</b>: BodySiteCodes <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> ()</span></p><h3>Criteria</h3><table class=\"grid\"><tr><td style=\"display: none\">-</td><td><b>Language</b></td><td><b>Expression</b></td></tr><tr><td style=\"display: none\">*</td><td>text/cql</td><td>BodySiteCodes</td></tr></table></blockquote><blockquote><p><b>stratifier</b></p><p><b>code</b>: NumberOfBodySiteCodes <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> ()</span></p><h3>Criteria</h3><table class=\"grid\"><tr><td style=\"display: none\">-</td><td><b>Language</b></td><td><b>Expression</b></td></tr><tr><td style=\"display: none\">*</td><td>text/cql</td><td>NumberOfBodySiteCodes</td></tr></table></blockquote></blockquote></div>"
  },
  "url" : "https://fhir.bbmri.de/Measure/SpecimenQualityReports",
  "version" : "1.2.0",
  "name" : "SpecimenQualityReports",
  "title" : "Specimen Quality Reports",
  "status" : "draft",
  "subjectCodeableConcept" : {
    "coding" : [
      {
        "system" : "http://hl7.org/fhir/resource-types",
        "code" : "Specimen"
      }
    ]
  },
  "date" : "2023-09-01T11:58:43+00:00",
  "publisher" : "bbmri.de",
  "contact" : [
    {
      "name" : "bbmri.de",
      "telecom" : [
        {
          "system" : "url",
          "value" : "bbmri.de"
        },
        {
          "system" : "email",
          "value" : "feedback@germanbiobanknode.de"
        }
      ]
    }
  ],
  "description" : "This measure contains various specimen related stratifiers to help to evaluate data quality.",
  "library" : [
    "https://fhir.bbmri.de/Library/SpecimenQualityReports"
  ],
  "scoring" : {
    "coding" : [
      {
        "system" : "http://terminology.hl7.org/CodeSystem/measure-scoring",
        "code" : "cohort"
      }
    ]
  },
  "group" : [
    {
      "population" : [
        {
          "code" : {
            "coding" : [
              {
                "system" : "http://terminology.hl7.org/CodeSystem/measure-population",
                "code" : "initial-population"
              }
            ]
          },
          "criteria" : {
            "language" : "text/cql",
            "expression" : "InInitialPopulation"
          }
        }
      ],
      "stratifier" : [
        {
          "code" : {
            "text" : "FirstSampleMaterialType"
          },
          "criteria" : {
            "language" : "text/cql",
            "expression" : "FirstSampleMaterialType"
          }
        },
        {
          "code" : {
            "text" : "NumberOfSampleMaterialTypes"
          },
          "criteria" : {
            "language" : "text/cql",
            "expression" : "NumberOfSampleMaterialTypes"
          }
        },
        {
          "code" : {
            "text" : "CollectedYear"
          },
          "criteria" : {
            "language" : "text/cql",
            "expression" : "CollectedYear"
          }
        },
        {
          "code" : {
            "text" : "CollectedMonth"
          },
          "criteria" : {
            "language" : "text/cql",
            "expression" : "CollectedMonth"
          }
        },
        {
          "code" : {
            "text" : "CollectedDay"
          },
          "criteria" : {
            "language" : "text/cql",
            "expression" : "CollectedDay"
          }
        },
        {
          "code" : {
            "text" : "CollectedHour"
          },
          "criteria" : {
            "language" : "text/cql",
            "expression" : "CollectedHour"
          }
        },
        {
          "code" : {
            "text" : "StorageTemperatureCodes"
          },
          "criteria" : {
            "language" : "text/cql",
            "expression" : "StorageTemperatureCodes"
          }
        },
        {
          "code" : {
            "text" : "NumberOfStorageTemperatureCodes"
          },
          "criteria" : {
            "language" : "text/cql",
            "expression" : "NumberOfStorageTemperatureCodes"
          }
        },
        {
          "code" : {
            "text" : "SampleDiagnosisICD10Codes"
          },
          "criteria" : {
            "language" : "text/cql",
            "expression" : "SampleDiagnosisICD10Codes"
          }
        },
        {
          "code" : {
            "text" : "NumberOfSampleDiagnosesICD10Codes"
          },
          "criteria" : {
            "language" : "text/cql",
            "expression" : "NumberOfSampleDiagnosesICD10Codes"
          }
        },
        {
          "code" : {
            "text" : "SampleDiagnosisICD10GMCodes"
          },
          "criteria" : {
            "language" : "text/cql",
            "expression" : "SampleDiagnosisICD10GMCodes"
          }
        },
        {
          "code" : {
            "text" : "NumberOfSampleDiagnosesICD10GMCodes"
          },
          "criteria" : {
            "language" : "text/cql",
            "expression" : "NumberOfSampleDiagnosesICD10GMCodes"
          }
        },
        {
          "code" : {
            "text" : "BodySiteCodes"
          },
          "criteria" : {
            "language" : "text/cql",
            "expression" : "BodySiteCodes"
          }
        },
        {
          "code" : {
            "text" : "NumberOfBodySiteCodes"
          },
          "criteria" : {
            "language" : "text/cql",
            "expression" : "NumberOfBodySiteCodes"
          }
        }
      ]
    }
  ]
}