BBMRI.de/GBA Implementation Guide
1.2.0 - CI Build

BBMRI.de/GBA Implementation Guide - Local Development build (v1.2.0). See the Directory of published versions

: Specimen Quality Reports - XML Representation

Draft as of 2023-09-01

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<Measure xmlns="http://hl7.org/fhir">
  <id value="SpecimenQualityReports"/>
  <text>
    <status value="generated"/>
    <div xmlns="http://www.w3.org/1999/xhtml"><p><b>Generated Narrative: Measure</b><a name="SpecimenQualityReports"> </a></p><div style="display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%"><p style="margin-bottom: 0px">Resource Measure &quot;SpecimenQualityReports&quot; </p></div><p><b>url</b>: <code>https://fhir.bbmri.de/Measure/SpecimenQualityReports</code></p><p><b>version</b>: 1.2.0</p><p><b>name</b>: SpecimenQualityReports</p><p><b>title</b>: Specimen Quality Reports</p><p><b>status</b>: draft</p><p><b>subject</b>: Specimen <span style="background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki"> (<a href="http://hl7.org/fhir/R4/codesystem-resource-types.html">ResourceType</a>#Specimen)</span></p><p><b>date</b>: 2023-09-01 11:58:43+0000</p><p><b>publisher</b>: bbmri.de</p><p><b>contact</b>: bbmri.de: <a href="bbmri.de">bbmri.de</a>,<a href="mailto:feedback@germanbiobanknode.de">feedback@germanbiobanknode.de</a></p><p><b>description</b>: This measure contains various specimen related stratifiers to help to evaluate data quality.</p><p><b>library</b>: <a href="Library-SpecimenQualityReports.html">Specimen Quality Reports</a></p><p><b>scoring</b>: Cohort <span style="background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki"> (<a href="http://terminology.hl7.org/5.0.0/CodeSystem-measure-scoring.html">MeasureScoring</a>#cohort)</span></p><blockquote><p><b>group</b></p><blockquote><p><b>population</b></p><p><b>code</b>: Initial Population <span style="background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki"> (<a href="http://terminology.hl7.org/5.0.0/CodeSystem-measure-population.html">MeasurePopulationType</a>#initial-population)</span></p><h3>Criteria</h3><table class="grid"><tr><td style="display: none">-</td><td><b>Language</b></td><td><b>Expression</b></td></tr><tr><td style="display: none">*</td><td>text/cql</td><td>InInitialPopulation</td></tr></table></blockquote><blockquote><p><b>stratifier</b></p><p><b>code</b>: FirstSampleMaterialType <span style="background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki"> ()</span></p><h3>Criteria</h3><table class="grid"><tr><td style="display: none">-</td><td><b>Language</b></td><td><b>Expression</b></td></tr><tr><td style="display: none">*</td><td>text/cql</td><td>FirstSampleMaterialType</td></tr></table></blockquote><blockquote><p><b>stratifier</b></p><p><b>code</b>: NumberOfSampleMaterialTypes <span style="background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki"> ()</span></p><h3>Criteria</h3><table class="grid"><tr><td style="display: none">-</td><td><b>Language</b></td><td><b>Expression</b></td></tr><tr><td style="display: none">*</td><td>text/cql</td><td>NumberOfSampleMaterialTypes</td></tr></table></blockquote><blockquote><p><b>stratifier</b></p><p><b>code</b>: CollectedYear <span style="background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki"> ()</span></p><h3>Criteria</h3><table class="grid"><tr><td style="display: none">-</td><td><b>Language</b></td><td><b>Expression</b></td></tr><tr><td style="display: none">*</td><td>text/cql</td><td>CollectedYear</td></tr></table></blockquote><blockquote><p><b>stratifier</b></p><p><b>code</b>: CollectedMonth <span style="background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki"> ()</span></p><h3>Criteria</h3><table class="grid"><tr><td style="display: none">-</td><td><b>Language</b></td><td><b>Expression</b></td></tr><tr><td style="display: none">*</td><td>text/cql</td><td>CollectedMonth</td></tr></table></blockquote><blockquote><p><b>stratifier</b></p><p><b>code</b>: CollectedDay <span style="background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki"> ()</span></p><h3>Criteria</h3><table class="grid"><tr><td style="display: none">-</td><td><b>Language</b></td><td><b>Expression</b></td></tr><tr><td style="display: none">*</td><td>text/cql</td><td>CollectedDay</td></tr></table></blockquote><blockquote><p><b>stratifier</b></p><p><b>code</b>: CollectedHour <span style="background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki"> ()</span></p><h3>Criteria</h3><table class="grid"><tr><td style="display: none">-</td><td><b>Language</b></td><td><b>Expression</b></td></tr><tr><td style="display: none">*</td><td>text/cql</td><td>CollectedHour</td></tr></table></blockquote><blockquote><p><b>stratifier</b></p><p><b>code</b>: StorageTemperatureCodes <span style="background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki"> ()</span></p><h3>Criteria</h3><table class="grid"><tr><td style="display: none">-</td><td><b>Language</b></td><td><b>Expression</b></td></tr><tr><td style="display: none">*</td><td>text/cql</td><td>StorageTemperatureCodes</td></tr></table></blockquote><blockquote><p><b>stratifier</b></p><p><b>code</b>: NumberOfStorageTemperatureCodes <span style="background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki"> ()</span></p><h3>Criteria</h3><table class="grid"><tr><td style="display: none">-</td><td><b>Language</b></td><td><b>Expression</b></td></tr><tr><td style="display: none">*</td><td>text/cql</td><td>NumberOfStorageTemperatureCodes</td></tr></table></blockquote><blockquote><p><b>stratifier</b></p><p><b>code</b>: SampleDiagnosisICD10Codes <span style="background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki"> ()</span></p><h3>Criteria</h3><table class="grid"><tr><td style="display: none">-</td><td><b>Language</b></td><td><b>Expression</b></td></tr><tr><td style="display: none">*</td><td>text/cql</td><td>SampleDiagnosisICD10Codes</td></tr></table></blockquote><blockquote><p><b>stratifier</b></p><p><b>code</b>: NumberOfSampleDiagnosesICD10Codes <span style="background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki"> ()</span></p><h3>Criteria</h3><table class="grid"><tr><td style="display: none">-</td><td><b>Language</b></td><td><b>Expression</b></td></tr><tr><td style="display: none">*</td><td>text/cql</td><td>NumberOfSampleDiagnosesICD10Codes</td></tr></table></blockquote><blockquote><p><b>stratifier</b></p><p><b>code</b>: SampleDiagnosisICD10GMCodes <span style="background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki"> ()</span></p><h3>Criteria</h3><table class="grid"><tr><td style="display: none">-</td><td><b>Language</b></td><td><b>Expression</b></td></tr><tr><td style="display: none">*</td><td>text/cql</td><td>SampleDiagnosisICD10GMCodes</td></tr></table></blockquote><blockquote><p><b>stratifier</b></p><p><b>code</b>: NumberOfSampleDiagnosesICD10GMCodes <span style="background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki"> ()</span></p><h3>Criteria</h3><table class="grid"><tr><td style="display: none">-</td><td><b>Language</b></td><td><b>Expression</b></td></tr><tr><td style="display: none">*</td><td>text/cql</td><td>NumberOfSampleDiagnosesICD10GMCodes</td></tr></table></blockquote><blockquote><p><b>stratifier</b></p><p><b>code</b>: BodySiteCodes <span style="background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki"> ()</span></p><h3>Criteria</h3><table class="grid"><tr><td style="display: none">-</td><td><b>Language</b></td><td><b>Expression</b></td></tr><tr><td style="display: none">*</td><td>text/cql</td><td>BodySiteCodes</td></tr></table></blockquote><blockquote><p><b>stratifier</b></p><p><b>code</b>: NumberOfBodySiteCodes <span style="background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki"> ()</span></p><h3>Criteria</h3><table class="grid"><tr><td style="display: none">-</td><td><b>Language</b></td><td><b>Expression</b></td></tr><tr><td style="display: none">*</td><td>text/cql</td><td>NumberOfBodySiteCodes</td></tr></table></blockquote></blockquote></div>
  </text>
  <url value="https://fhir.bbmri.de/Measure/SpecimenQualityReports"/>
  <version value="1.2.0"/>
  <name value="SpecimenQualityReports"/>
  <title value="Specimen Quality Reports"/>
  <status value="draft"/>
  <subjectCodeableConcept>
    <coding>
      <system value="http://hl7.org/fhir/resource-types"/>
      <code value="Specimen"/>
    </coding>
  </subjectCodeableConcept>
  <date value="2023-09-01T11:58:43+00:00"/>
  <publisher value="bbmri.de"/>
  <contact>
    <name value="bbmri.de"/>
    <telecom>
      <system value="url"/>
      <value value="bbmri.de"/>
    </telecom>
    <telecom>
      <system value="email"/>
      <value value="feedback@germanbiobanknode.de"/>
    </telecom>
  </contact>
  <description
               value="This measure contains various specimen related stratifiers to help to evaluate data quality."/>
  <library value="https://fhir.bbmri.de/Library/SpecimenQualityReports"/>
  <scoring>
    <coding>
      <system value="http://terminology.hl7.org/CodeSystem/measure-scoring"/>
      <code value="cohort"/>
    </coding>
  </scoring>
  <group>
    <population>
      <code>
        <coding>
          <system
                  value="http://terminology.hl7.org/CodeSystem/measure-population"/>
          <code value="initial-population"/>
        </coding>
      </code>
      <criteria>
        <language value="text/cql"/>
        <expression value="InInitialPopulation"/>
      </criteria>
    </population>
    <stratifier>
      <code>
        <text value="FirstSampleMaterialType"/>
      </code>
      <criteria>
        <language value="text/cql"/>
        <expression value="FirstSampleMaterialType"/>
      </criteria>
    </stratifier>
    <stratifier>
      <code>
        <text value="NumberOfSampleMaterialTypes"/>
      </code>
      <criteria>
        <language value="text/cql"/>
        <expression value="NumberOfSampleMaterialTypes"/>
      </criteria>
    </stratifier>
    <stratifier>
      <code>
        <text value="CollectedYear"/>
      </code>
      <criteria>
        <language value="text/cql"/>
        <expression value="CollectedYear"/>
      </criteria>
    </stratifier>
    <stratifier>
      <code>
        <text value="CollectedMonth"/>
      </code>
      <criteria>
        <language value="text/cql"/>
        <expression value="CollectedMonth"/>
      </criteria>
    </stratifier>
    <stratifier>
      <code>
        <text value="CollectedDay"/>
      </code>
      <criteria>
        <language value="text/cql"/>
        <expression value="CollectedDay"/>
      </criteria>
    </stratifier>
    <stratifier>
      <code>
        <text value="CollectedHour"/>
      </code>
      <criteria>
        <language value="text/cql"/>
        <expression value="CollectedHour"/>
      </criteria>
    </stratifier>
    <stratifier>
      <code>
        <text value="StorageTemperatureCodes"/>
      </code>
      <criteria>
        <language value="text/cql"/>
        <expression value="StorageTemperatureCodes"/>
      </criteria>
    </stratifier>
    <stratifier>
      <code>
        <text value="NumberOfStorageTemperatureCodes"/>
      </code>
      <criteria>
        <language value="text/cql"/>
        <expression value="NumberOfStorageTemperatureCodes"/>
      </criteria>
    </stratifier>
    <stratifier>
      <code>
        <text value="SampleDiagnosisICD10Codes"/>
      </code>
      <criteria>
        <language value="text/cql"/>
        <expression value="SampleDiagnosisICD10Codes"/>
      </criteria>
    </stratifier>
    <stratifier>
      <code>
        <text value="NumberOfSampleDiagnosesICD10Codes"/>
      </code>
      <criteria>
        <language value="text/cql"/>
        <expression value="NumberOfSampleDiagnosesICD10Codes"/>
      </criteria>
    </stratifier>
    <stratifier>
      <code>
        <text value="SampleDiagnosisICD10GMCodes"/>
      </code>
      <criteria>
        <language value="text/cql"/>
        <expression value="SampleDiagnosisICD10GMCodes"/>
      </criteria>
    </stratifier>
    <stratifier>
      <code>
        <text value="NumberOfSampleDiagnosesICD10GMCodes"/>
      </code>
      <criteria>
        <language value="text/cql"/>
        <expression value="NumberOfSampleDiagnosesICD10GMCodes"/>
      </criteria>
    </stratifier>
    <stratifier>
      <code>
        <text value="BodySiteCodes"/>
      </code>
      <criteria>
        <language value="text/cql"/>
        <expression value="BodySiteCodes"/>
      </criteria>
    </stratifier>
    <stratifier>
      <code>
        <text value="NumberOfBodySiteCodes"/>
      </code>
      <criteria>
        <language value="text/cql"/>
        <expression value="NumberOfBodySiteCodes"/>
      </criteria>
    </stratifier>
  </group>
</Measure>